Rosenberg lab at Stanford University

Noah A Rosenberg
+1 650 721 2599 (office phone)
+1 650 724 5122 (lab phone)
+1 650 724 5114 (fax)


Mailing address
Department of Biology
Stanford University
371 Jane Stanford Way
Stanford, CA 94305-5020 USA

Last modified 7-13-2011

(Posted July 17, 2013) The data of Huang et al. (2011) provide an update of the data of Pemberton et al. (2008) with the addition of eight populations.

(Posted June 27, 2008) The data of Pemberton et al. (2008) provide an update of the data of Conrad et al. (2006), incorporating two more populations, updating some genotype calls, and reducing some minor errors. We advise use of the updated Pemberton et al. (2008) files.

HGDP+India+Africa SNP data download — Huang et al. (2011)

[Download zip of all data files]

Download data files individually (all are plain text files)
[Download readme]
[Download unphased HGDP+India+Africa data (2810 SNPs)]
[Download phased HGDP+India+Africa data (2810 SNPs)]
[Download unphased HGDP+India+Africa data (1195 SNPs on chromosome 21)]
[Download phased HGDP+India+Africa data (1272 SNPs on chromosome 21)]
[Download unphased HGDP+India+Africa data (517 SNPs on chromosome 21)]
[Download phased overlapping HapMap data (517 SNPs on chromosome 21)]
[SNP polarity (44 repolarized SNPs)]

Please send comments or problems with these data to Noah Rosenberg.

HGDP+India SNP data download — Pemberton et al. (2008)

[Download gzipped tar of all data files]

Download data files individually (all are plain text files)
[Download readme]
[Download unphased HGDP+India data]
[Download phased HGDP+India data]
[Download phased overlapping HapMap data]
[Download phased combined HGDP+India and HapMap data]

Please send comments or problems with these data to Noah Rosenberg.

HGDP SNP data download — Conrad et al. (2006)

[Download gzipped tar of all data files]

Download data files individually (all are plain text files)
[Download readme]
[Download unphased HGDP data]
[Download phased HGDP data]
[Download phased overlapping HapMap data]
[Download phased combined HGDP and HapMap data]

Please send comments or problems with these data to Noah Rosenberg or Jonathan Pritchard.

History


July 17, 2013 - initial upload of data files from Huang et al. (2011)
June 27, 2008 - initial upload of data files from Pemberton et al. (2008)
May 23, 2007 - initial upload of data files from Conrad et al. (2006)