Rosenberg lab at Stanford University

Noah A Rosenberg
+1 650 721 2599 (office phone)
+1 650 724 5122 (lab phone)
+1 650 724 5114 (fax)


Mailing address
Department of Biology
Stanford University
371 Jane Stanford Way
Stanford, CA 94305-5020 USA

Last modified 2-28-2022

Monophyler download

The software is for Linux or Windows.

[Download Monophyler for Linux]
[Download Monophyler for Windows]
[Download manual]
[Download article 1: arbitrary species trees (PNAS 113: 8002-8009)]
[Download article 2: 3 and 4 taxon calculations (TPB 129: 133-147)]
[Download article 3: arbitrary numbers of groups, arbitrary species trees]

Winzip will unzip the Windows version.

To use the program in Linux, unzip the files in an appropriate directory using 

unzip monophyler_linux_2_0_xcb3.zip

Please send comments or problems with Monophyler to Rohan Mehta.

New in version 2.0, posted February 28, 2022

-Version 2.0 adds formulas from a third paper (Mehta, Steel and Rosenberg 2022) to add to those previously encoded from Mehta et al. (2016) and Mehta and Rosenberg (2019).

For earlier versions of monophyler send email to Rohan Mehta

[monophyler 1.0 for Linux (includes the manual)]
[monophyler 1.0 for Windows (includes the manual)]