ID_extended Number Length ID Name Scaffold Start Stop gene09896_300up_300down gene1 3023 gene09896 Pentatricopeptide repeat-containing protein At5g50280, chloroplastic, Precursor (similar to) scf0513150 1290461 1293483 gene25463_300up_300down gene2 6698 gene25463 DNA repair protein complementing XP-C cells (probable) scf0513120 211776 218473 gene31484_300up_300down gene3 5416 gene31484 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (RPN-I), Precursor (probable) scf0513094 2145633 2151048 gene08653_300up_300down gene4 5472 gene08653 E3 ubiquitin-protein ligase HECTD1 (probable) scf0513134 865185 870656 gene19344_300up_300down gene5 2961 gene19344 Cytochrome P450 704C1 (probable) scf0513170 4683963 4681003 gene02335_300up_300down gene6 2127 gene02335 Probable transporter MCH1 scf0512965 568391 570517 gene09580_300up_300down gene7 2832 gene09580 Pentatricopeptide repeat-containing protein At3g09650, chloroplastic, Precursor (similar to) scf0513149 49710 52541 gene12320_300up_300down gene8 2776 gene12320 Protein lap1 (probable) scf0513187 2509165 2506390 gene28330_300up_300down gene9 4699 gene28330 Alpha-mannosidase 2 (AMAN II) (probable) scf0513124.4 556225 560923 gene16877_300up_300down gene10 7797 gene16877 Phytoene dehydrogenase, chloroplastic/chromoplastic, Precursor (putative) scf0513162 2575930 2568134 gene07060_300up_300down gene11 7763 gene07060 Phospholipase D p1 (AtPLDp1) (putative) scf0513159 2398497 2406259 gene13582_300up_300down gene12 2366 gene13582 BTB/POZ domain-containing protein At5g48800 (probable) scf0513177 3714304 3711939 gene03608_300up_300down gene13 4022 gene03608 Protein regulator of cytokinesis 1 (probable) scf0513158.4 224881 228902 gene05983_300up_300down gene14 4111 gene05983 DNA repair protein XRCC1 (probable) scf0513161 357186 361296 gene11478_300up_300down gene15 4217 gene11478 Muscleblind-like protein 3 (probable) scf0513147 297568 301784 gene14166_300up_300down gene16 3315 gene14166 Putative pentatricopeptide repeat-containing protein At5g59900 scf0513178.3 720297 723611 gene18685_300up_300down gene17 5048 gene18685 L-fucose kinase (Fucokinase) (probable) scf0513170 1369102 1374149 gene15844_300up_300down gene18 4322 gene15844 Metal transporter Nramp1 (AtNramp1) (similar to) scf0513165 2444628 2448949 gene24640_300up_300down gene19 4179 gene24640 Probable urea active transporter 1 scf0513011 101838 106016 gene30190_300up_300down gene20 1791 gene30190 Protein-S-isoprenylcysteine O-methyltransferase (pcCMT) (probable) scf0513101 196613 198403 gene31345_300up_300down gene21 6119 gene31345 Ubiquitin carboxyl-terminal hydrolase 15 (AtUBP15) (similar to) scf0513106 441944 448062 gene07331_300up_300down gene22 2937 gene07331 hypothetical protein scf0513160.6 50719 47783 gene30425_300up_300down gene23 1967 gene30425 Probable polyol transporter 4 (putative) scf0513104 817200 815234 gene13202_300up_300down gene24 2646 gene13202 Keratin-associated protein 5-4 (UHS-Ser-2) (probable) scf0513190 2078313 2080958 gene29299_300up_300down gene25 4490 gene29299 Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic, Precursor (similar to) scf0513094 1214288 1209799 gene06581_300up_300down gene26 2693 gene06581 Putative selenium-binding protein scf0513162 2167344 2164652 gene15834_300up_300down gene27 18166 gene15834 ABC transporter C family member 13 (ABC transporter ABCC.13) (similar to) scf0513165 2367284 2385449 gene14467_300up_300down gene28 4809 gene14467 Phospholipid:diacylglycerol acyltransferase (PDAT) (probable) scf0513184 331876 327068 gene19654_300up_300down gene29 12272 gene19654 Phospholipase A-2-activating protein (PLA2P) (probable) scf0513172 6493 18764 gene25925_300up_300down gene30 2021 gene25925 mTERF domain-containing protein 3, mitochondrial (mTERFL), Precursor (probable) scf0513112 313152 315172 gene03310_300up_300down gene31 3871 gene03310 Breast carcinoma-amplified sequence 3 homolog (probable) scf0513157 362666 358796 gene30829_300up_300down gene32 2585 gene30829 Uveal autoantigen with coiled-coil domains and ankyrin repeats (probable) scf0513105 1653518 1650934 gene17942_300up_300down gene33 2936 gene17942 Serine/threonine-protein kinase PBS1 (probable) scf0513176 505734 508669 gene16777_300up_300down gene34 2245 gene16777 Eukaryotic translation initiation factor 3 subunit B (eIF3b) (putative) scf0513168.6 1082915 1085159 gene08624_300up_300down gene35 3444 gene08624 Cell division protease ftsH homolog, chloroplastic, Precursor (similar to) scf0513134 713545 716988 gene28559_300up_300down gene36 2595 gene28559 General transcription factor IIH subunit 2 (probable) scf0513126 185299 187893 gene06545_300up_300down gene37 4593 gene06545 Tripartite motif-containing protein 3 (probable) scf0513162 1959142 1963734 gene07464_300up_300down gene38 16962 gene07464 Zinc finger CCCH domain-containing protein 13 (probable) scf0513136 903165 920126 gene22381_300up_300down gene39 5421 gene22381 Sn1-specific diacylglycerol lipase beta (DGL-beta) (probable) scf0513062 748709 754129 gene01053_300up_300down gene40 2667 gene01053 Pentatricopeptide repeat-containing protein At5g11310, mitochondrial, Precursor (similar to) scf0512938 130300 132966 gene31309_300up_300down gene41 1796 gene31309 Alkylated DNA repair protein alkB homolog 8 (probable) scf0513106 171184 172979 gene05539_300up_300down gene42 4883 gene05539 Protein AUXIN RESPONSE 4 (similar to) scf0513160.6 2112167 2117049 gene25519_300up_300down gene43 3876 gene25519 Myosin-1 (MyHC-2x) (probable) scf0513119 611139 615014 gene30622_300up_300down gene44 1573 gene30622 Pyruvate dehydrogenase E1 component subunit beta (similar to) scf0513104 407865 406293 gene18254_300up_300down gene45 3479 gene18254 Calcium-dependent protein kinase 1 (AtCDPK 1) (similar to) scf0513176 1932972 1929494 gene28260_300up_300down gene46 2916 gene28260 Ferredoxin--nitrite reductase, chloroplastic, Precursor (putative) scf0513125 1505483 1508398 gene14783_300up_300down gene47 4956 gene14783 Cytochrome P450 90B1 (Dwarf4) (putative) scf0513192 3386332 3381377 gene16220_300up_300down gene48 3982 gene16220 Glucan 1,3-beta-glucosidase, Precursor (probable) scf0513168.1 637877 633896 gene05491_300up_300down gene49 5413 gene05491 Protein STRUBBELIG-RECEPTOR FAMILY 7, Precursor (putative) scf0513160.6 1772685 1767273 gene01831_300up_300down gene50 8452 gene01831 HEAT repeat-containing protein 6 (probable) scf0512956 186183 177732 gene34105_300up_300down gene51 1763 gene34105 Pentatricopeptide repeat-containing protein At3g21470 (probable) scf0513044 991297 989535 gene23345_300up_300down gene52 4212 gene23345 Intracellular protein transport protein USO1 (Int-1) (probable) scf0513008 1536859 1532648 gene27750_300up_300down gene53 5485 gene27750 Breast carcinoma-amplified sequence 3 homolog (probable) scf0513123 654093 659577 gene24275_300up_300down gene54 4116 gene24275 E3 ubiquitin-protein ligase MARCH11 (probable) scf0512999 91947 96062 gene30214_300up_300down gene55 2941 gene30214 hypothetical protein scf0513101 322960 325900 gene13675_300up_300down gene56 4649 gene13675 Inner membrane protein yohK (probable) scf0513178.5 487758 492406 gene14155_300up_300down gene57 4537 gene14155 [Protein-PII] uridylyltransferase (PII uridylyl-transferase) (probable) scf0513178.3 654122 658658 gene04871_300up_300down gene58 3697 gene04871 Pyruvate kinase (PK) (probable) scf0513153 832503 836199 gene07891_300up_300down gene59 5006 gene07891 Protein DAMAGED DNA-BINDING 2 (similar to) scf0513140 866980 871985 gene15828_300up_300down gene60 2757 gene15828 Probable receptor-like protein kinase At5g38990, Precursor scf0513165 2323985 2321229 gene14461_300up_300down gene61 5199 gene14461 Protein saal1 (probable) scf0513184 272699 277897 gene12671_300up_300down gene62 3045 gene12671 Abnormal spindle-like microcephaly-associated protein homolog (probable) scf0513192 249987 253031 gene29878_300up_300down gene63 7715 gene29878 Glycogen synthase (probable) scf0513085 224487 216773 gene08027_300up_300down gene64 8937 gene08027 Probable E3 ubiquitin-protein ligase HERC2 scf0513141 330299 339235 gene32082_300up_300down gene65 3807 gene32082 Probable polygalacturonase (PG) scf0513098 2550688 2546882 gene21878_300up_300down gene66 11187 gene21878 Alpha-glucosidase yihQ (probable) scf0513073 184369 173183 gene23731_300up_300down gene67 1890 gene23731 ATPase ravA (probable) scf0512989 347926 346037 gene05461_300up_300down gene68 3462 gene05461 Remorin (probable) scf0513160.6 1569381 1572842 gene19618_300up_300down gene69 2928 gene19618 Homer protein homolog 2 (Homer-2) (probable) scf0513171 450505 453432 gene32182_300up_300down gene70 3663 gene32182 Peroxisomal membrane protein PEX14 (probable) scf0513098 3030966 3034628 gene11028_300up_300down gene71 6566 gene11028 MLO-like protein 4 (AtMlo4) (similar to) scf0513146.5 119705 126270 gene09387_300up_300down gene72 2255 gene09387 hypothetical protein scf0513135 1508205 1505951 gene12546_300up_300down gene73 3372 gene12546 Surface presentation of antigens protein spaS (probable) scf0513190 17339 13968 gene03684_300up_300down gene74 3529 gene03684 Putative F-box protein At4g22170 (probable) scf0513158.4 602422 598894 gene28218_300up_300down gene75 4630 gene28218 Ubiquitin-activating enzyme E1 2 (similar to) scf0513125 1276507 1281136 gene15706_300up_300down gene76 5172 gene15706 DEAD-box ATP-dependent RNA helicase 56 (similar to) scf0513165 3470676 3475847 gene25161_300up_300down gene77 5361 gene25161 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic, Precursor (probable) scf0513024 381648 387008 gene29166_300up_300down gene78 3423 gene29166 Protein FAR1-RELATED SEQUENCE 5 (putative) scf0513094 1662290 1665712 gene28243_300up_300down gene79 3454 gene28243 Probable receptor-like protein kinase At1g30570, Precursor scf0513125 1411242 1414695 gene18678_300up_300down gene80 4337 gene18678 Calcium-transporting ATPase, endoplasmic reticulum-type (putative) scf0513170 1335094 1330758 gene22926_300up_300down gene81 6642 gene22926 Pleiotropic drug resistance protein 3 (similar to) scf0513003 284284 290925 gene24834_300up_300down gene82 12614 gene24834 Mediator of RNA polymerase II transcription subunit 13 (probable) scf0513015 675534 688147 gene24025_300up_300down gene83 1762 gene24025 Probable cinnamyl alcohol dehydrogenase (CAD) (similar to) scf0512991 846353 844592 gene05003_300up_300down gene84 3728 gene05003 Probable beta-1,3-galactosyltransferase 16 (similar to) scf0513154 444475 448202 gene24244_300up_300down gene85 4122 gene24244 Protein IQ-DOMAIN 14 (probable) scf0512996 183848 187969 gene28629_300up_300down gene86 3105 gene28629 Inner centromere protein (probable) scf0513089 51291 54395 gene26791_300up_300down gene87 3770 gene26791 Probable serine/threonine-protein kinase DDB_G0280111 scf0513127 239633 235864 gene21678_300up_300down gene88 3345 gene21678 Serine/threonine-protein kinase-like protein ACR4 (AtCR4), Precursor (putative) scf0513070 180846 184190 gene16900_300up_300down gene89 8310 gene16900 Complement component C6, Precursor (probable) scf0513162 2724292 2732601 gene14984_300up_300down gene90 5819 gene14984 hypothetical protein scf0513194 62452 56634 gene17551_300up_300down gene91 6200 gene17551 Sterol 3-beta-glucosyltransferase (probable) scf0513164 2567817 2574016 gene14993_300up_300down gene92 3686 gene14993 Monogalactosyldiacylglycerol synthase, chloroplastic (CsMGD1), Precursor (putative) scf0513194 100103 103788 gene23425_300up_300down gene93 9631 gene23425 Pullulanase 1, chloroplastic (AtPU1), Precursor (putative) scf0513008 191136 181506 gene08048_300up_300down gene94 5866 gene08048 hypothetical protein scf0513132 555600 549735 gene18949_300up_300down gene95 4819 gene18949 Uncharacterized membrane protein At1g63010 (similar to) scf0513170 4203723 4208541 gene24302_300up_300down gene96 10178 gene24302 Fanconi anemia group D2 protein homolog (Protein FACD2) (probable) scf0512999 250582 260759 gene09291_300up_300down gene97 5897 gene09291 Protein argonaute 1B (OsAGO1b) (similar to) scf0513135 960927 955031 gene21620_300up_300down gene98 3343 gene21620 Ankyrin repeat and BTB/POZ domain-containing protein 1 (probable) scf0513072 47183 50525 gene22185_300up_300down gene99 3627 gene22185 C4-dicarboxylate transport sensor protein dctB (probable) scf0513060 90465 86839 gene28247_300up_300down gene100 4443 gene28247 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial (MCCase subunit beta), Precursor (similar to) scf0513125 1432380 1427938 gene09367_300up_300down gene101 10818 gene09367 hypothetical protein scf0513135 1399861 1410678 gene19390_300up_300down gene102 4349 gene19390 Myosin-11 (probable) scf0513170 4850183 4854531 gene22963_300up_300down gene103 3168 gene22963 Transcription factor PIF3 (bHLH 8) (probable) scf0513003 135913 132746 gene09610_300up_300down gene104 4305 gene09610 ABC transporter G family member 28 (ABC transporter ABCG.28) (similar to) scf0513149 685933 681629 gene16311_300up_300down gene105 1881 gene16311 Root phototropism protein 3 (probable) scf0513168.1 1278616 1280496 gene09615_300up_300down gene106 4303 gene09615 RNA polymerase sigma factor rpoD (Sigma-A) (probable) scf0513149 715199 719501 gene23026_300up_300down gene107 2895 gene23026 Indole-3-acetic acid-amido synthetase GH3.17 (AtGH3-17) (putative) scf0513004 80713 83607 gene06563_300up_300down gene108 2993 gene06563 Serine hydroxymethyltransferase 1 (SHMT 1) (putative) scf0513162 2074535 2071543 gene27786_300up_300down gene109 2719 gene27786 PAX-interacting protein 1 (probable) scf0513123 852653 849935 gene10071_300up_300down gene110 2865 gene10071 Omega-6 fatty acid desaturase, chloroplastic, Precursor (putative) scf0513151 241266 244130 gene28686_300up_300down gene111 1640 gene28686 Secretion-regulating guanine nucleotide exchange factor (DelGEF) (probable) scf0513088 182899 184538 gene20037_300up_300down gene112 3904 gene20037 Uncharacterized protein At4g19900 (similar to) scf0513173 1252996 1256899 gene23736_300up_300down gene113 1983 gene23736 hypothetical protein scf0512989 383164 381182 gene10239_300up_300down gene114 1794 gene10239 Presenilin-like protein At1g08700 (similar to) scf0513151 1048069 1049862 gene17145_300up_300down gene115 4847 gene17145 Inner membrane protein oxaA (probable) scf0513163 2598310 2593464 gene31237_300up_300down gene116 3713 gene31237 Ligatin (probable) scf0513108 306592 310304 gene24638_300up_300down gene117 12015 gene24638 Alpha-glucosidase 2 (probable) scf0513011 94000 81986 gene06778_300up_300down gene118 2922 gene06778 Acyl-CoA-binding domain-containing protein 4 (Acyl-CoA binding protein 4) (probable) scf0513159 1263862 1266783 gene20992_300up_300down gene119 12746 gene20992 Anaphase-promoting complex subunit 1 (APC1) (probable) scf0513044 818899 806154 gene16154_300up_300down gene120 5468 gene16154 Dolichol kinase (probable) scf0513168.1 268756 263289 gene01715_300up_300down gene121 2096 gene01715 Glutamyl-tRNA reductase 2, chloroplastic (GluTR), Precursor (similar to) scf0512984 876544 878639 gene15629_300up_300down gene122 7249 gene15629 hypothetical protein scf0513196 1423336 1416088 gene30489_300up_300down gene123 9479 gene30489 hypothetical protein scf0513103 401539 392061 gene18303_300up_300down gene124 8726 gene18303 Probable ATP-dependent RNA helicase DHX36 scf0513176 2194836 2203561 gene03653_300up_300down gene125 2420 gene03653 hypothetical protein scf0513158.4 473651 471232 gene19156_300up_300down gene126 4694 gene19156 Lysine-specific demethylase 3A (probable) scf0513170 1684384 1689077 gene08972_300up_300down gene127 2808 gene08972 UPF0415 protein C7orf25 homolog (probable) scf0513135 716038 713231 gene20812_300up_300down gene128 5332 gene20812 hypothetical protein scf0513041 261235 255904 gene07942_300up_300down gene129 4144 gene07942 Potassium transporter 1 (AtPOT1) (similar to) scf0513140 1273543 1277686 gene26105_300up_300down gene130 4924 gene26105 Rab9 effector protein with Kelch motifs (probable) scf0513111 1075210 1070287 gene15204_300up_300down gene131 3404 gene15204 Cytokinin dehydrogenase 5 (CKO5), Precursor (similar to) scf0513194 1107474 1104071 gene25369_300up_300down gene132 2753 gene25369 Pre-mRNA polyadenylation factor fip1 (probable) scf0513119 122463 119711 gene27943_300up_300down gene133 5205 gene27943 Golgin candidate 6 (AtGC6) (putative) scf0513124.6 836938 842142 gene16098_300up_300down gene134 3214 gene16098 RING finger protein 13 (probable) scf0513166 392290 395503 gene10086_300up_300down gene135 2932 gene10086 Transmembrane 9 superfamily member 4, Precursor (probable) scf0513151 310017 312948 gene12685_300up_300down gene136 3094 gene12685 Serine/threonine-protein kinase (similar to) scf0513192 301034 304127 gene32640_300up_300down gene137 2878 gene32640 Abscisic acid 8-hydroxylase 3 (ABA 8-hydroxylase 3) (probable) scf0513100 155185 158062 gene23780_300up_300down gene138 4919 gene23780 Exosome complex exonuclease rrp6 (probable) scf0512991 382914 377996 gene24646_300up_300down gene139 3636 gene24646 Coiled-coil domain-containing protein 157 (probable) scf0513011 128636 132271 gene29895_300up_300down gene140 4031 gene29895 Cellulose synthase-like protein D1 (AtCslD1) (putative) scf0513085 340412 336382 gene01790_300up_300down gene141 5384 gene01790 Aspartyl-tRNA synthetase (AspRS) (similar to) scf0512957 99034 93651 gene25041_300up_300down gene142 5256 gene25041 tRNA (guanine-N(1)-)-methyltransferase (probable) scf0513115 211279 206024 gene02215_300up_300down gene143 7280 gene02215 ABC transporter B family member 2 (ABC transporter ABCB.2) (putative) scf0512963 207004 199725 gene06334_300up_300down gene144 2553 gene06334 Exocyst complex component 7 (rExo70) (probable) scf0513158.5 775647 778199 gene32117_300up_300down gene145 3666 gene32117 Pentatricopeptide repeat-containing protein At5g25630 (probable) scf0513098 2709122 2712787 gene01874_300up_300down gene146 5548 gene01874 Dentin sialoprotein, Precursor (probable) scf0512956 405807 400260 gene27963_300up_300down gene147 1950 gene27963 Elongation factor Tu, chloroplastic (EF-Tu), Precursor (similar to) scf0513124.6 945136 947085 gene24407_300up_300down gene148 2310 gene24407 SUN domain-containing protein 2, Precursor (probable) scf0513029 59518 57209 gene09668_300up_300down gene149 1773 gene09668 S-adenosylmethionine synthetase 3 (AdoMet synthetase 3) (putative) scf0513149 959251 961023 gene28245_300up_300down gene150 2181 gene28245 Limkain-b1 (probable) scf0513125 1423058 1420878 gene01909_300up_300down gene151 2675 gene01909 Major facilitator superfamily domain-containing protein 5 (probable) scf0512956 595486 598160 gene12500_300up_300down gene152 4805 gene12500 Tubulin--tyrosine ligase-like protein 12 (probable) scf0513192 685037 689841 gene30118_300up_300down gene153 3037 gene30118 Putative DNA-binding protein ESCAROLA (probable) scf0513102 282447 285483 gene22419_300up_300down gene154 6848 gene22419 Probable inositol transporter 1 (putative) scf0513062 1110048 1103201 gene01521_300up_300down gene155 3088 gene01521 ABC transporter G family member 26 (ABC transporter ABCG.26) (putative) scf0512978 826314 823227 gene12558_300up_300down gene156 2224 gene12558 hypothetical protein scf0513190 91492 89269 gene14575_300up_300down gene157 2242 gene14575 Cell cycle checkpoint protein RAD17 (AtRAD17) (similar to) scf0513192 2296723 2298964 gene18499_300up_300down gene158 2223 gene18499 DELLA protein RGL1 (RGA-like protein) (probable) scf0513170 319364 317142 gene07892_300up_300down gene159 8067 gene07892 ABC transporter G family member 31 (ABC transporter ABCG.31) (putative) scf0513140 873864 881930 gene14097_300up_300down gene160 2065 gene14097 GTPase obgE (probable) scf0513178.3 268009 265945 gene03874_300up_300down gene161 3952 gene03874 Serine/threonine-protein kinase SNT7, chloroplastic, Precursor (putative) scf0513158.4 1378622 1382573 gene27696_300up_300down gene162 4648 gene27696 Beta-amylase (probable) scf0513122 384003 388650 gene11116_300up_300down gene163 4326 gene11116 Probable serine/threonine-protein kinase mps1 scf0513144 644156 639831 gene02115_300up_300down gene164 3673 gene02115 hypothetical protein scf0512965 623301 619629 gene18143_300up_300down gene165 5104 gene18143 Pentatricopeptide repeat-containing protein At5g02830, chloroplastic, Precursor (putative) scf0513177 67557 72660 gene16939_300up_300down gene166 4528 gene16939 Preprotein translocase subunit secY, chloroplastic, Precursor (similar to) scf0513163 681691 677164 gene15966_300up_300down gene167 2058 gene15966 Probable sodium-coupled neutral amino acid transporter 6 scf0513165 2787629 2785572 gene27607_300up_300down gene168 3607 gene27607 Methenyltetrahydrofolate synthetase domain-containing protein (probable) scf0513131 1623056 1619450 gene07926_300up_300down gene169 4858 gene07926 Probable NADH dehydrogenase scf0513140 1147297 1142440 gene14696_300up_300down gene170 3387 gene14696 Myosin-10 (NMMHC II-b) (probable) scf0513194 2016416 2019802 gene19378_300up_300down gene171 6520 gene19378 Spastin (probable) scf0513170 4788210 4794729 gene30405_300up_300down gene172 3243 gene30405 Probable serine/threonine-protein kinase DDB_G0280133 scf0513104 696097 699339 gene26790_300up_300down gene173 3432 gene26790 Putative receptor protein kinase ZmPK1, Precursor (probable) scf0513127 231252 227821 gene15891_300up_300down gene174 7592 gene15891 Serine/threonine-protein kinase fray2 (similar to) scf0513165 1922150 1914559 gene32260_300up_300down gene175 2211 gene32260 Probable NADH dehydrogenase, chloroplastic/mitochondrial, Precursor (similar to) scf0513098 267875 270085 gene07792_300up_300down gene176 5174 gene07792 DNA-binding protein SATB1 (probable) scf0513139.5 294478 289305 gene18475_300up_300down gene177 2854 gene18475 Pentatricopeptide repeat-containing protein At1g79490, mitochondrial, Precursor (putative) scf0513170 184317 187170 gene03141_300up_300down gene178 4745 gene03141 DNA polymerase I, thermostable (probable) scf0513157 788317 783573 gene17249_300up_300down gene179 4919 gene17249 Pathogenesis-related homeodomain protein (PRHA) (similar to) scf0513163 2228133 2233051 gene09622_300up_300down gene180 5679 gene09622 Phosphoglycerate kinase (probable) scf0513149 761922 756244 gene24141_300up_300down gene181 4160 gene24141 Protein trpH (probable) scf0512993 10206 14365 gene21604_300up_300down gene182 5750 gene21604 Nuclear pore complex protein Nup133 (probable) scf0513072 329225 323476 gene30392_300up_300down gene183 2355 gene30392 Remorin (probable) scf0513104 628056 630410 gene24250_300up_300down gene184 1605 gene24250 U5 small nuclear ribonucleoprotein 40 kDa protein (U5 snRNP 40 kDa protein) (similar to) scf0512996 262405 264009 gene30048_300up_300down gene185 1959 gene30048 1-aminocyclopropane-1-carboxylate oxidase homolog 1 (probable) scf0513086 357366 359324 gene17250_300up_300down gene186 2641 gene17250 Protein CHLOROPLAST IMPORT APPARATUS 2, Precursor (probable) scf0513163 2245894 2243254 gene22085_300up_300down gene187 3093 gene22085 Glucan 1,3-beta-glucosidase, Precursor (probable) scf0513078 123644 120552 gene17026_300up_300down gene188 2191 gene17026 Peroxidase 45 (Atperox P45), Precursor (putative) scf0513163 1705850 1703660 gene16000_300up_300down gene189 2763 gene16000 Protein FAR1-RELATED SEQUENCE 6 (similar to) scf0513165 3008721 3011483 gene02475_300up_300down gene190 4339 gene02475 Pentatricopeptide repeat-containing protein At2g41720 (similar to) scf0512969 362134 357796 gene15177_300up_300down gene191 2572 gene15177 Mannan endo-1,4-beta-mannosidase 7 (AtMAN7), Precursor (similar to) scf0513194 974488 977059 gene09551_300up_300down gene192 5691 gene09551 Cat eye syndrome critical region protein 2 (probable) scf0513135 2395052 2389362 gene10579_300up_300down gene193 4863 gene10579 Translocase of chloroplast 159, chloroplastic (AtToc159) (probable) scf0513144 130241 125379 gene13339_300up_300down gene194 3755 gene13339 Zinc finger CCCH domain-containing protein 48 (AtC3H48) (similar to) scf0513190 2770664 2774418 gene03965_300up_300down gene195 11257 gene03965 PAP-associated domain-containing protein 5 (TRF4-2) (probable) scf0513153 318298 329554 gene00817_300up_300down gene196 17338 gene00817 Sacsin (probable) scf0512935 288044 270707 gene07367_300up_300down gene197 3764 gene07367 Calcium-binding protein 4 (CaBP4) (probable) scf0513137 152218 155981 gene31269_300up_300down gene198 3436 gene31269 Probable E3 ubiquitin-protein ligase HERC2 scf0513107 193456 196891 gene23128_300up_300down gene199 3131 gene23128 conserved hypothetical protein scf0513004 832967 829837 gene22838_300up_300down gene200 2493 gene22838 Probable indole-3-acetic acid-amido synthetase GH3.1 (AtGH3-1) (similar to) scf0513068 196419 193927 gene06392_300up_300down gene201 4459 gene06392 Protein tex (probable) scf0513158.5 1055771 1051313 gene27813_300up_300down gene202 2496 gene27813 Uncharacterized protein At3g63140, chloroplastic, Precursor (similar to) scf0513123 115436 112941 gene10536_300up_300down gene203 2770 gene10536 hypothetical protein scf0513143 913305 916074 gene15996_300up_300down gene204 9959 gene15996 Protein KIAA0664 homolog (probable) scf0513165 2981524 2971566 gene11621_300up_300down gene205 3378 gene11621 E3 ubiquitin-protein ligase KEG (probable) scf0513148 237282 233905 gene07363_300up_300down gene206 6903 gene07363 Pentatricopeptide repeat-containing protein At4g34830, chloroplastic, Precursor (similar to) scf0513137 136924 130022 gene16959_300up_300down gene207 2332 gene16959 Probable LRR receptor-like serine/threonine-protein kinase At5g45780, Precursor scf0513163 447402 445071 gene18567_300up_300down gene208 5548 gene18567 Myb-like protein H (probable) scf0513170 682876 688423 gene24653_300up_300down gene209 2233 gene24653 Serpentine receptor class gamma-10 (Protein srg-10) (probable) scf0513012 30137 32369 gene24860_300up_300down gene210 8837 gene24860 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 (AtTPS1) (putative) scf0513017 260024 268860 gene11263_300up_300down gene211 4698 gene11263 NAD kinase 2, chloroplastic (AtNADK-2), Precursor (similar to) scf0513144 1442602 1437905 gene25633_300up_300down gene212 5864 gene25633 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (DAPA aminotransferase) (probable) scf0513121 35206 29343 gene20081_300up_300down gene213 5627 gene20081 Putative phospholipid-transporting ATPase 5 (AtALA5) scf0513173 1528221 1533847 gene02334_300up_300down gene214 2992 gene02334 Kynurenine--oxoglutarate transaminase (probable) scf0512965 554839 551848 gene17946_300up_300down gene215 3663 gene17946 RNA polymerase sigma factor rpoD (Sigma-A) (probable) scf0513176 54181 57843 gene30526_300up_300down gene216 5460 gene30526 Mediator of RNA polymerase II transcription subunit 12 (probable) scf0513103 707685 702226 gene13528_300up_300down gene217 7237 gene13528 Steroidogenic acute regulatory protein, mitochondrial (StAR), Precursor (probable) scf0513178.5 271454 278690 gene24511_300up_300down gene218 3536 gene24511 Diacylglycerol kinase 1 (DAG kinase 1) (probable) scf0513031 212271 215806 gene00258_300up_300down gene219 10131 gene00258 4-alpha-glucanotransferase (D-enzyme) (probable) scf0512948 30613 40743 gene23601_300up_300down gene220 1809 gene23601 Receptor-type tyrosine-protein phosphatase U (R-PTP-U), Precursor (similar to) scf0512990 392413 394221 gene02540_300up_300down gene221 2700 gene02540 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (probable) scf0512968 123531 126230 gene08871_300up_300down gene222 3897 gene08871 Peroxisomal acyl-coenzyme A oxidase 1 (AOX 1) (putative) scf0513135 94602 98498 gene15773_300up_300down gene223 3718 gene15773 Sec1 family domain-containing protein 2 (probable) scf0513165 1594196 1597913 gene01049_300up_300down gene224 3296 gene01049 E3 ubiquitin-protein ligase At1g63170 (probable) scf0512938 112078 108783 gene24475_300up_300down gene225 6610 gene24475 Protein translocase subunit secA, chloroplastic, Precursor (putative) scf0513030 535058 541667 gene18011_300up_300down gene226 2725 gene18011 Suppressor protein SRP40 (probable) scf0513176 1425040 1422316 gene15991_300up_300down gene227 3563 gene15991 Glycerol kinase (GK) (similar to) scf0513165 2939647 2936085 gene19706_300up_300down gene228 3261 gene19706 Ribosomal RNA large subunit methyltransferase I (probable) scf0513173 79448 82708 gene28281_300up_300down gene229 10980 gene28281 DNA mismatch repair protein mutS (probable) scf0513124.4 279560 290539 gene05024_300up_300down gene230 3018 gene05024 Beta-galactosidase (Lactase) (probable) scf0513154 643890 646907 gene10742_300up_300down gene231 5016 gene10742 Pyruvate kinase isozyme G, chloroplastic, Precursor (similar to) scf0513143 612299 607284 gene06030_300up_300down gene232 1590 gene06030 Monoglyceride lipase (MGL) (probable) scf0513161 735994 734405 gene24477_300up_300down gene233 2890 gene24477 Probable polygalacturonase (PG) (similar to) scf0513030 545789 548678 gene15239_300up_300down gene234 5019 gene15239 Vacuolar proton translocating ATPase 100 kDa subunit (probable) scf0513194 1250386 1245368 gene28317_300up_300down gene235 7487 gene28317 Cytochrome P450 71D7 (probable) scf0513124.4 468572 476058 gene28689_300up_300down gene236 2222 gene28689 Taxadiene 5-alpha hydroxylase (probable) scf0513088 199391 201612 gene12346_300up_300down gene237 7352 gene12346 Cleft lip and palate transmembrane protein 1 homolog (probable) scf0513189 249359 242008 gene08786_300up_300down gene238 2797 gene08786 Probable receptor-like protein kinase At2g42960 scf0513134 1543272 1546068 gene04205_300up_300down gene239 2520 gene04205 Phosphatidylinositol 4-kinase type 2-alpha (probable) scf0513152 1005887 1003368 gene07947_300up_300down gene240 2372 gene07947 Zinc transporter 6, chloroplastic, Precursor (similar to) scf0513140 1328438 1326067 gene12090_300up_300down gene241 2247 gene12090 Pentatricopeptide repeat-containing protein At5g18475 (similar to) scf0513187 888693 890939 gene12945_300up_300down gene242 7691 gene12945 Polyphosphoinositide phosphatase (probable) scf0513192 1132951 1125261 gene14886_300up_300down gene243 4109 gene14886 Transmembrane and coiled-coil domain-containing protein 4 (probable) scf0513192 2695788 2699896 gene07645_300up_300down gene244 2487 gene07645 Amino acid permease 2 (putative) scf0513137 689870 687384 gene14077_300up_300down gene245 2607 gene14077 Probable receptor-like protein kinase At5g47070 (similar to) scf0513178.3 171680 174286 gene15520_300up_300down gene246 1899 gene15520 Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (GNT-II) (probable) scf0513196 2152664 2150766 gene22056_300up_300down gene247 2634 gene22056 Pentatricopeptide repeat-containing protein At2g27610 (similar to) scf0513075 720475 717842 gene16123_300up_300down gene248 3626 gene16123 Putative cyclic nucleotide-gated ion channel 15 scf0513169 49566 53191 gene16115_300up_300down gene249 4948 gene16115 hypothetical protein scf0513168.1 562537 557590 gene16206_300up_300down gene250 2030 gene16206 ATP-dependent RNA helicase DBP3 (probable) scf0513168.1 182107 180078 gene28151_300up_300down gene251 2317 gene28151 Putative tRNA pseudouridine synthase scf0513125 889743 892059 gene17112_300up_300down gene252 3651 gene17112 Phytosulfokine receptor 2 (AtPSKR2), Precursor (similar to) scf0513163 2837880 2841530 gene28569_300up_300down gene253 2854 gene28569 Abscisic acid 8-hydroxylase 4 (ABA 8-hydroxylase 4) (putative) scf0513125 1569028 1571881 gene11230_300up_300down gene254 1898 gene11230 DNA-(apurinic or apyrimidinic site) lyase (AP lyase) (probable) scf0513144 1275154 1273257 gene00141_300up_300down gene255 9649 gene00141 NHL repeat-containing protein 2 (probable) scf0512945 23329 32977 gene22828_300up_300down gene256 5769 gene22828 Katanin p80 WD40-containing subunit B1 (Katanin p80 subunit B1) (probable) scf0513068 125776 131544 gene31508_300up_300down gene257 2055 gene31508 Pentatricopeptide repeat-containing protein At1g77360, mitochondrial, Precursor (putative) scf0513094 2330580 2328526